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Hayashi, I. (1996) Five years experiment on vegetation recovery of drought deciduous woodland in Kitui, Kenya. J. Arid Environ., 34: 351-361.
Machida, R. and R. Ohbayashi (1996) Thysanurans from the Ogasawara Islands (Zygentoma, Lepismatidae) Ctenolepisma longicaudata and Acrotelsa collaris new to the Japanese fauna.Jpn. J. Entomol., 64: 365-366.
Tojo, K. and R. Machida (1997) Embryogenesis of Ephemera japonica McLachlan (Insecta: Ephemeroptera). Proc. Arthropod. Embryol. Soc. Jpn., 32: 25-28.
Tojo, K. and R. Machida (1997) Embryogenesis of the mayfly Ephemera japonica McLachlan (Insecta: Ephemeroptera, Ephemeridae), with special reference to abdominal formation. J. Morphol., 234: 97-107.
Hayashi, I. and J.-I. Fujii (1997) Autecology of successional dominants of the cool-temperate forest in Japan: On sapling stage of fagus crenata Blume. 菅平研報, (14): 1-13.
Hayashi, M. and O. Higashikawa (1997) Homopteral-Auchenorrhyncha and Heteroptera (Insecta, Rhynchota) from Sugadaira, Central Honsyu, Japan. 菅平研報, (14): 15-56.
Ikeda, Y. and R. Machida (1998)Embryogenesis of a dipluran, Lepidocampa weberi Oudemans (Hexapoda: Diplura): External morphology. J. Morphol., 237: 101-115.
Degawa, Y. (1998) Taxonomic Studies on the Family Mortierellaceae (Mucorales, Zygomycetes). 204 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Tokumasu, S. (1998) Fungal successions on pine needles fallen at different seasons: the succession of interior colonizers. Mycoscience, 39: 409-416.
Tokumasu, S. (1998) Fungal successions on pine needles fallen at different seasons: the succession of surface colonizers. Mycoscience,39: 417-423.
Tojo, K. and R. Machida (1998) Early embryonic development of the mayfly Ephemera japonica McLachlan (Insecta: Ephemeroptera, Ephemeridae). J. Morphol., 238: 327-335.
Tojo, K. and R. Machida (1998) Egg structures of Japanese Ephemera (Insecta: Ephemeroptera: Ephemeridae). Entomol. Sci., 1: 573-579.
Machida, R. and H. Ando (1998) Evolutionary changes in developmental potentials of the embryo proper and embryonic membranes along with the derivative structures in Atelocerata, with special reference to Hexapoda (Arthropoda). Proc. Arthropod. Embryol. Soc. Jpn., 33: 1-13.
Suzuki, T., N. Fujitake, Y. Ueda and Y. Oji (1999) Vertical distribution of main soil hydroxyanthraquinones in soil profiles. Soil Sci. Plant Nutr., 45: 551-561.
Tojo, K. (1999) The Embryology of the Mayfly Ephemera japonica McLachlan (Insecta: Ephemeroptera, Ephemeridae). 160 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Kurihara, Y. and S. Tokumasu (2000) Coemansia Species isolated from soils in the Fukiage Gardens in the Imperial Palace Grounds. Mem. Natl. Sci. Mus., Tokyo, (34): 205-209.
Kurihara, Y., S.Tokumasu and C.-Y. Chien (2000) Coemansia furcata sp. nov. and its distribution in Japan and Taiwan. Mycoscience, 41: 579-583.
Suyama Y., K. Obayashi and I. Hayashi (2000) Clonal structure in a dwarf bamboo (Sasa senanensis) population inferred from amplified fragment length polymorphism (AFLP) fingerprints. Mol. Ecol., 9: 901-906.
Machida, R. (2000) Serial homology of the mandible and maxilla in the jumping bristletail Pedetontus unimaculatus Machida, based on external embryology (Hexapoda: Archaeognatha, Machilidae). J. Morphol., 245: 19-28.
Machida, R. (2000) Usefulness of low-vacuum scanning electron microscopy in descriptive insect embryology. Proc. Arthropod. Embryol. Soc. Jpn., 35: 17-19.
Ikeda, Y. (2001) The Embryology of Lepidocampa weberi Oudemans (Hexapoda: Diplura). 156 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Ikeda, Y. and R. Machida (2001) Embryogenesis of the dipluran Lepidocampa weberi Oudemans (Hexapoda: Diplura, Campodeidae): Formation of dorsal organ and related phenomena. J. Morphol., 249: 242-251.
Iwamoto, S. and S. Tokumasu (2001) Dematiaceous hyphomycetes inhabiting decaying blackish needles of Abies firma and their distribution in the Kanto district, Japan. Mycoscience, 41: 273-279.
Kurihara, Y., Y. Degawa and S. Tokumasu (2001) A new genus Myconymphaea (Kickxellales) with peculiar septal plugs. Mycol. Res., 105: 1397-1402.
Tokumasu, S. (2001) Geographical distribution of Sporidesmium goidanichii in pine forests of Japan. Mycoscience, 42: 579-593.
Tojo, K. (2001) Redescription of Brachycercus japonicus Gose, 1980 (Ephemeroptera, Caenidae). Entomol. Sci., 4: 369-377.
Tojo, K. and R. Machida (2001) Affinity of Ephemeroptera: A review of the proposed phylogenetic relationships of the major pterygote groups, the the ephemeroptera, odonata, and neoptera, based on comparative embryology. 21st Cen. Aquatic Entomol. East Asia, Proc. 1st Symp. Aquatic Entomol. East Asia, 85-96.
Sturm, H. and R. Machida (2001) Archaeognatha. Handbuch der Zoologie, Band IV Arthropoda: Insecta (N. P. Kristensen and R. G. Beutel eds.), 216 pp. de Gruyter Verlag, Berlin.
Inaba, S. and S. Tokumasu (2002) Saprolegnia semihypogyna sp. nov., a saprolegniaceous oomycete isolated from soil in Japan. Mycoscience, 43: 73-76.
Inaba, S. and S. Tokumasu (2002) The genus Brevilegnia (Saprolegniales, Oomycetes) in Japan. Mycoscience, 43: 59-66.
Iwamoto, S., S. Tokumasu, Y. Suyama and M. Kakishima (2002) Molecular phylogeny of four selected species of the strictly anamorphic genus Thysanophora using nuclear ribosomal DNA sequences. Mycoscience, 43: 169-180.
Uchifune, T. and R. Machida (2002) Note on the early germ band stage in Galloisiana yuasai Asahina (Insecta: Notoptera). Proc. Arthropod. Embryol. Soc. Jpn., 37: 45-48.
Kurihata, Y. (2002) Taxonomic Study on the Order Kickxellales (Zygomycetes, Zuygomycota).163 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
小池啓一・小野展嗣・町田龍一郎・田辺力 (2002) 小学館の図鑑NEO「昆虫」. 207 pp. 小学館.
Sakuma, M. and R. Machida (2002) Germ band formation in a centipede Scolopocryptops rubiginosus L. Koch (Chilopoda: Scolopendromorpha). Proc. Arthropod. Embryol. Soc. Jpn., 37: 19-23.
Tojo, K. and R. Machida (2002) Affinity of Ephemeroptera: A review of the proposed phylogenetic relationships of the major pterygote groups, the Ephemeroptera, Odonata and Neoptera, based on comparative embryology. The 21th Century and Aquatic Entomology in East Asia. Proceedings of (Y. J. Bae ed.), pp. 85-96. 1st Joint Meeting and Symposium of Aquatic Entomological Societies of East Asia.
Masumoto, M. and R. Machida (2002) Amniotic pore of a silverfish, Lepisma saccharina Linnaeus (Hexapoda: Zygentoma, Lepismatidae). Proc. Arthropod. Embryol. Soc. Jpn., 37: 25-27.
Machida, R., Y. Ikeda and K. Tojo (2002) Evolutionary changes in developmental potentials of the embryo proper and embryonic membranes in Hexapoda: A synthesis revised. Proc. Arthropod. Embryol. Soc. Jpn., 37: 1-11.
Kato, J. and I. Hayashi (2003) The determination and prediction of pine forest succession in Sugadaira, Central Japan. Kor. J. Ecol., 26: 155-163.
Kojima, H., S. Mariko, T. Nakamura and I. Hayashi (2003) Bud burst process and late-frost experiments on Fagus crenata and Quercus mongolica ssp. crispula. Vegetation Sci., 29: 55-64.
Tojo, K. and R. Machida (2003) Techniques in embryological studies of mayflies (Insecta, Ephemeroptera). Proc. Joint Meet. 10th Int. Conf. Ephemeroptera 14th Int. Symp. Plecoptera, 205-209.
Kurihara, Y., Y. Degawa and S. Tokumasu (2004) Two novel kickxellalean fungi, Mycoëmilia scoparia gen. sp. nov. and Ramicandelaber breviphora sp. nov. Mycol. Res., 108: 1143-1152.
Sakuma, M. and R. Machida (2004) Germ band formation of a centipede Scolopendra subspinipes L. Koch (Chilopoda: Scolopendromorpha). Proc. Arthropod. Embryol. Soc. Jpn., 39: 41-43.
Tsutsumi, K. and R. Machida (2004) A new technique for elucidating the fine morphological structures of animals, applied to the analysis of the micropylar canal passage in a snakefly, Inocellia japonica Okamoto (Insecta: Neuroptera, Raphidiodea). Proc. Arthropod. Embryol. Soc. Jpn., 39: 45-46.
Tsutsumi, T., R. Machida, K. Tojo, T. Uchifune, K.-D. Klass and M. D. Picker (2004) Transmission electron microscopic observations of the egg membranes of a South African heel-walker, Karoophasma biedouwensis (Insecta: Mantophasmatodea). Proc. Arthropod. Embryol. Soc. Jpn., 39: 23-29.
Tojo, K., R. Machida, K.-D. Klass and M. D. Picker (2004) Biology of South African heel-walkers, with special reference to reproductive biology (Insecta: Mantophasmatodea). Proc. Arthropod. Embryol. Soc. Jpn., 39: 15-21.
Masumoto, M. and R. Machida (2004) Localization of lepismatid embryo in the egg, during the diapause stage (Hexapoda: Zygentoma, Lepismatidae). Proc. Arthropod. Embryol. Soc. Jpn., 39: 9-13.
Machida, R. and I. Takahashi (2004) Rearing technique for proturans (Hexapoda: Protura). Pedobiologia, 48: 227-229.
Machida, R., K. Tojo, T. Tsutsumi, T. Uchifune, K.-D. Klass, M. D. Picker and L. Pretorius (2004) Embryonic development of heel-walkers: Reference to some prerevolutionary stages (Insecta: Mantophasmatodea). Proc. Arthropod. Embryol. Soc. Jpn., 39: 31-39.
Yazaki, Y., S. Mariko and H. Koizumi (2004) Carbon dynamics and budget in a Miscanthus sinensis grassland in Japan. Ecol. Res., 19: 511-520.
Uchifune, T. (2005) Embryological Studies on Galloisiana yuasai Asahina (Insecta: Grylloblattodea). 156 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Uchifune, T. and R. Machida (2005) Egg membranes of Galloisiana yuasai Asahina (Insecta: Grylloblattodea). Proc. Arthropod. Embryol. Soc. Jpn., 40: 9-14.
Uchifune, T. and R. Machida (2005) Embryonic development of Galloisiana yuasai Asahina, with special reference to external morphology (Insecta: Grylloblattodea). J. Morphol., 266: 182-207.
Kawada, K., A. G. Vovk, O. V. Filatova, M. Araki, T. Nakamura and I. Hayashi (2005) Floristic composition and plant biomass production of steppe communities in the vicinity of Kharkiv, Ukraine. Grassland Sci., 51: 205-213.
Kusakari, M. and R. Machida (2005) Germ band type of Dermaptera: A reference to some early embryos of Anisolabis maritima Gené (Insecta). Proc. Arthropod. Embryol. Soc. Jpn., 40: 27-29.
Sakuma, M. (2005) Embryonic and Postembryonic Developments of the Centipede Scolopocryptops rubiginosus L. Koch (Chilopoda: Scolopendromorpha). 117 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Sakuma, M. and R. Machida (2005) Clypeolabrum formation of a centipede Scolopocryptops rubiginosus L. Koch (Chilopoda: Scolopendromorpha). Proc. Arthropod. Embryol. Soc. Jpn., 40: 1-4.
Tsutsumi, T., K. Tojo and R. Machida (2005) Ovarian structure and oogenesis of the South African heel-walker Karoophasma biedouwensis (Insecta: Mantophasmatodea). Proc. Arthropod. Embryol. Soc. Jpn., 40: 15-22.
Masumoto, M. and R. Machida (2005) Origin of ventral epidermis in a silverfish, Lepisma saccharina Linnaeus (Insecta: Zygentoma, Lepismatidae). Proc. Arthropod. Embryol. Soc. Jpn., 40: 5-8.
Yahata, K. (2005) Ovarian structure of five penicillate Diplopods (Diplopoda: Penicillata). Proc. Arthropod. Embryol. Soc. Jpn., 40: 23-25.
Dallai, R., R. Machida, T. Uchifune, P. Lupeti and F. Frati (2005) The sperm structure of Galloisiana yuasai (Insecta, Grylloblattodea) and implications for the phylogenetic position of Grylloblattodea. Zoomorphology, 124: 205-212.
Uchifune, T. and R. Machida (2006) Chorion of a South African heel-walker, Karoophasma biedouwensis Klass et al.: SEM observations (Insecta: Mantophasmatodea). Proc. Arthropod. Embryol. Soc. Jpn., 41: 29-35.
Kato, J. and I. Hayashi (2006) Quantitative analysis of a stand of Pinus densiflora undergoing succession to Quercus mongolica ssp. crispula: 1. A 31-year record of growth and population dynamics of the canopy trees. Ecol. Res., 21: 503-509.
Kobayashi, T., M. Watanabe, H. Ohta and N. Fujitake (2006) Vertical distribution of chloroform-extractable green fraction in several Andosol and Cambisol profiles. Soil Sci. Plant Nutr., 52: 274-283.
塘研 (2006) 長野県木祖村におけるキスジラクダムシの記録. New Entomol., 55: 49-50.
Tsutsumi, K. and R. Machida (2006) Embryonic development of a snakefly, Inocellia japonica Okamoto: Its outline (Insecta: Neuroptera, Raphidiodea). Proc. Arthropod. Embryol. Soc. Jpn., 41: 37-45.
Hayashi, I., K. Kawada, A. Akimova and T. Nakamura (2006) Floristic composition and plant biomass of the grasslands in the vicinity of Pavlodar, Kazakhstan. Grassland Sci., 52: 141-145.
Fukui, M. and R. Machida (2006) Embryonic development of Baculentulus densus (Imadaté): Its outline (Hexapoda: Protura, Acerentomidae). Proc. Arthropod. Embryol. Soc. Jpn., 41: 21-28.
Masumoto, M. (2006) Studies on the Egg Membranes and Embryonic Membranes of Zygentoma (Insecta): Innovation of the Egg Membrane and Embryonic Membrane Systems under the Invasion and Adaptation to Terrestrial Habitats in Insects. 136 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Masumoto, M. and R. Machida (2006) Development of embryonic membranes in the silverfish Lepisma saccharina Linnaeus (Insecta: Zygentoma, Lepismatidae). Tiss. Cell, 38: 159-169.
町田龍一郎 (2006) イシノミについて.昆虫と自然,41: 9-13.
Machida, R. (2006) Evidence from embryology for reconstructing the relationships of hexapod basal clades. Arthropod Syst. Phylog., 64: 95-104.
町田龍一郎・増本三香 (2006) 日本産家屋性シミ目の同定法.家屋害虫,27: 73-76.
Yashiro, Y., S. Mariko and H. Koizumi (2006) Emission of nitrous oxide through a anowpack in ten types of temperate ecosystems in Japan. Ecol. Res., 21: 776-781.
Oe, Y. and S. Mariko (2007) Seasonal variation in CH4 uptake and CO2 emission in a Japanese temperate deciduous forest soil. In: Global Climate Change and Response of Carbon Cycle in the Equatorial Pacific and Indian Oceans and Adjacent Landmasses (eds. H. Kawahata et al.)” Elsevier.
Kato, J. and I. Hayashi (2007) Quantitative analysis of a stand of Pinus densiflora undergoing succession to Quercus mongolica ssp. crispula: II. Growth and population dynamics of Q. mongolica ssp. crispula under P. densiflora canopy. Ecol. Res., 22: 527-533.
Kurihara, Y., R. Machida, M. Fukui, T. Okuda and S. Harayama (2007) Entomopathogenic fungi isolated from laboratory-reared Baculentulus densus (Acerentomidae, Protura). Edaphologia, 80: 25-28.
Jintsu, Y., T. Uchifune and R. Machida (2007) Egg Membranes of a web-spinner, Aposthonia japonica (Okajima) (Insecta: Embioptera). Proc. Arthropod. Embryol. Soc. Jpn., 42: 1-5.
Chun, Y.-M., H.-J. Lee and I. Hayashi (2007) Syntaxonomy and syngeography of Korean red pine (Pinus densiflora) forest in Korea. Kor. J. Environ. Eco., 21: 257-277.
Dallai, R., R. Machida, Y. Jintsu, F. Frati and P. Lupetti (2007) The sperm structure of Embioptera (Insecta) and phylogenetic considerations. Zoomorphology, 126: 53-59.
Ueno, K., Y. Watarai, A. Kusada, N. Hirose and S. Shimizu (2008) Spatial heterogeneity of snow covers in Sugadaira, central Japan. Tsukuba Geoenviron. Sci., 3: 33-39.
Kato, J. and I. Hayashi (2008) Phenological studies of deciduous trees in the cool temperate region of Japan. J. Ecol. Field Biol., 31: 193-200.
Tsutsumi, K. (2008) Embryonic Development of a Snakefly, Inocellia japonica Okamoto (Insecta: Neuroptera, Raphidiodea). 151 pp. Dr. Sci. Thesis, Institute of Biol. Sci., Univ. Tsukuba.
Hayashi, I. and K. Kawada, M. Kurosu, A. Batjagal, T. Tsundeekhuu and T. Nakamura (2008) Grazing effects on floristic composition and above ground plant biomass of the grassland in the Northeastern Mongolian steppe. J. Ecol. Field Biol., 31: 115-123.
Uchifune, T. and R. Machida (2009) The “Polyneopteran Comparative Embryological Project”: Present and future. Proc. Arthropod. Embryol. Soc. Jpn., 43: 57-59.
Jintsu, Y. and R. Machida (2009) TEM Observations of the Egg Membranes of a Webspinner, Aposthonia japonica (Okajima) (Insecta: Embioptera). Proc. Arthropod. Embryol. Soc. Jap., 44: 19-24.
Shimizu, S. and R. Machida (2009) Eggs and Their Deposition and Care of a Primitive Earwig Diplatys flavicollis (Shiraki) (Dermaptera: Diplatyidae). Proc. Arthropod. Embryol. Soc. Jap., 44: 29-32.
Sekiya, K. and R. Machida (2009) Embryonic development of Occasjapyx japonicus (Enderlein): Notable features (Hexapoda: Diplura, Dicellurata). Proc. Arthropod. Embryol. Soc. Jap., 44: 13-18.
Fukui, M. and R. Machida (2009) Formation of the Entognathy in Baculentulus densus (Imadaté) (Hexapoda: Protura, Acerentomidae). Proc. Arthropod. Embryol. Soc. Jap., 44: 25-27.
Machida, R. (2009) Reconstruction of hexapod basal clades from embryological evidence. Proc. Arthropod. Embryol. Soc. Jpn., 43: 39-42.
Rost-Roszkowska, M. M., R. Machida and M. Fukui (2009) The role of cell death in the midgut epithelium in Filientomon takanawanum (Protura). Tiss. Cell, 42. (in press).
Machida, R. (2009) Reconstruction of hexapod basal clades from embryological evidence. Proceedings of the Arthropodan Embryological Society of Japan, 43: 39-42.
Kunin W.E., P. Vergeer, T. Kenta, M.P. Davey, T. Burke, F.I. Woodward, P. Quick, M. Mannarelli, N.S. Watson-Haigh and R. Butlin (2009) Variation at range margins across multiple spatial scales: environmental temperature, population genetics and metabolomic phenotype. Proceedings of The Royal Society B. 276: 1495-1506.
Degawa, Y. (2009) Secondary spore formation in Orchesellaria mauguioi (Asellariales, Trichomycetes) and its taxonomic and ecological implications. Mycoscience, 50:247-252.
Takemoto, S., Nakamura, H. and Y. Degawa (2009) The first record of Rosellinia Aquila in Kanagawa Prefecture and the analysis of morphological variation among the collections. Bull. Kanagawa prefect. Mus. (Nat. Sci.), 38: 21-29.
Yamaguchi, K., Degawa, Y. and A. Nakagiri (2009) An aero-aquatic fungus, Peyronelina glomerulata, is shown to have teleomorphic affinities with cyphelloid basidiomycetes. Mycoscience, 50: 156-164.
Sato, T., Okamoto, J., Degawa, Y., Matsunari, S., Takahashi, K. and K. Tomioka (2009) White rust of Ipomoea caused by Albugo ipomoeae-panduratae and A. ipomoeae-hardwickii and their host specificity. J. Gen. Plant Pathol. 75: 46-51.
Grant, N., Onda,Y., Kakizaki, Y., Ito, K., Watling, J., and Robinson, S.(2009) Two Cys or not two Cys, that is the question? Alternative oxidase in the thermogenic Nelumbo nucifera. Plant Physiology, 150: 987-995.
Seymour, R.S., Ito. Y., Onda, Y. and Ito, K. (2009) Effects of floral thermogenesis on pollen function in Asian skunk cabbage Symplocarpus renifolius. Biology Letters, 5: 568-570.
Suzuki, R.O., Kato, T., Maesako, Y. & Furukawa, A. (2009) Morphological and population responses to deer grazing for herbaceous species in Nara Park, western Japan. Plant Species Biology 24: 145-155.
Niwa, N., A. Akimoto-Kato, T. Niimi, K. Tojo, R. Machida and S. Hayashi (2010) Evolutionary origin of the insect wing via integration of two developmental modules. Evolution and Development, 12: 168-176.
Zizzani, Z. V., R. Machida, K. Tsutsumi, D. Reynoso-Velasco, P. Lupetti and R. Dallai (2010) Ultrastructural studies on euspermatozoa and paraspermatozoa in Mantispidae (Insecta, Neuroptera). Tissue and Cell, 42: 81-87.
Jintsu, Y., T. Uchifune and R. Machida (2010) Structural features of eggs of the primitive phasmatodean Timema monikensis Vickery & Sandoval, 1998 (Insecta: Phasmatodea, Timematidae). Arthropod Systematics and Phylogeny, 68: 125-132.
Oka, K., N. Yoshiyama, K. Tojo, R. Machida and M. Hatakeyama (2010) Characterization of abdominal appendages in the sawfly, Athalia rosae (Hymenoptera), by morphological and gene expression analyses. Development, Genes and Evolution, 220: 53-59.
Dallai, R., Mercati, D., Carapelli, A., Nardi, F., Machida, R., Sekiya, K., Frati, F. (2010) Sperm accessory microtubules suggest the placement of Diplura as the sister-group of Insecta s.s. Arthoropod Structure and Development, vol. 40 1: 77-92.
Yasuo Iimuraa, Mari Fujimotoa, Mitsuru Hirotab, Kenji Tamurab, Teruo Higashib, Koyo Yonebayashic, Nobuhide Fujitakea (2010) Effects of ecological succession on surface mineral horizons in Japanese volcanic ash soil. Geoderma 159:122-130.
Nagamitsu,T., H. Yamagishi, T. Kenta, N. Inari and E. Kato (2010) Competitive effects of the exotic Bombus terrestris on native bumble bees in Japan revealed by a field removal experiment. Population Ecology, 52: 123-136.
富塚茂和・町田龍一郎 (2010) トビムシ目の発生学的研究 (Developmental study of Collembola). Proceedings of the Arthropodan Embryological Society of Japan, 45: 5-6.
福井眞生子・町田龍一郎 (2010) サイコクカマアシムシBaculentulus densus (Imadate) の発生学的研究-内顎口形 成について-(六脚類・カマアシムシ目)(Embryonic development of Baculentulus densus (Imadate) :Entognathy formation). Proceedings of the Arthropodan Embryological Society of Japan, 45: 7.
関谷薫・町田龍一郎 (2010) ヤマトハサミコムシ Occasjapyx japonicus (Enderlein) の発生学的研究(六脚類・コムシ目・ハサミコムシ亜目)(Embryonic development of Occasjapyx japonicus (Enderlein)). Proceedings of the Arthropodan Embryological Society of Japan, 45: 9.
中垣裕貴・佐久間将・丹羽尚・林茂生・町田龍一郎 (2010)ヒトツモンイシノミ Pedetontus unimaculatus Machida の engrailed 相同遺伝子の発現解析(六脚類:イシノミ目)(Expression analysis of engrailed homologues of jumping bristletail Pedetontus unimaculatus Machida (Archaeognatha: Hexapoda). Proceedings of the Arthropodan Embryological Society of Japan, 45: 11.
丹羽尚・秋元-加藤愛・新美輝幸・東城幸治・町田龍一郎・林茂生(2010)翅の進化モデル:イシノミ類とカゲロウ類に おける翅形成遺伝子群の発言パターンより(A model for insect wing evolution based on expression patterns of wing-related genes in jumping bristletail and mayfly. Proceedings of the Arthropodan Embryological Society of Japan, 45: 2010.
神通芳江・町田龍一郎 (2010) コケシロアリモドキAposthonia japonica (Okajima)の腹板および側板形成(昆虫綱・ シロアリモドキ目)(Formation of sternum and pleuron of a webspinner, Aposthonia japonica (Okajima) (Inseccta: Embioptera). Proceedings of the Arthropodan Embryological Society of Japan, 45: 17.
真下雄太・町田龍一郎 (2010) 絶翅目の発生学的研究に向けて(昆虫綱)(To the embryological study of Zoraptera. Proceedings of the Arthropodan Embryological Society of Japan, 45: 17.
Xiao, N., S. Inaba, M. Tojo, Y. Degawa, S. Fujiu, Y. Hanada, S. Kudoh, and T. Hoshino (2010) Antifreeze activities of various fungi and Stramenopila isolated from Antarctica. North American Fungi 5(5): 215-220.
Suzuki, R.O.,Suzuki, S.N. (2011) Facilitative and competitive effects of a large species with defensive traits on a grazing-adapted, small species in a long-term deer grazing habitat. Plant Ecology 212: 343-351.
Wipfler, B., R. Machida, B. Muller and R. G. Beutel (2011) On the head morphology of Grylloblattodea (Insecta) and the systematicposition on the order, with a new nomenclature for the head muscles of Dicondylia. Systematic Entomology, 36 (2): 241-266.
Mashimo, Y., R. Machida, R. Dallai, M. Gottardo,D.Mercati, and R. G. Beutel (2011) Egg structures of Zorotypus caudelli Karny (Insecta, Zoraptera,Zorotypidae). Tissue and Cell, 43: 230-237.
Shimizu, S. and R. Machida (2011) Notes on mating and oviposition of a primitive representative of the higher Forficulina, Apachyus chartaceus (de Haan)(Insecta: Dermaptera: Apachyidae). Arthropod Systematics and Phylogeny, 69: 75-81.
Shimizu, S. and R. Machida (2011) Reproductive biology and postembryonic development in the basal earwig Diplatys flavicollis(Shiraki) (Insecta: Dermaptera: Diplatyidae). Arthropod Systematics and Phylogeny, 69: 83-97.
Fujita, M., S. Shimizu and R. Machida (2011) Establishing a culture of Eucorydia yasumatsui Asahina (Insecta: Blattaria, Polyphagidae).Proceedings of the Arthropodan Embryological Society of Japan, 46: 1-3.
Thipaksorn, A., R. Machida, C. Nalepa and K. Maekawa (2011) An SEM observation on the crest structure of oothecae of awood-feeeding cockroach, Cryptocercus punctulatus Scudder (Insecta: Blattodea, Cryptocercidae). Proceedings of the Arthropodan Embryological Society of Japan, 46: 19-20.
Dallai, R., D. Mercati, M. Gottardo, R. Machida, Y. Mashimo and R. G. Beutel (2011) The male reproductive system of Zorotypus caudelli Karny (Zoraptera): Sperm structure and spermiogenesis. Arthropod Structure and Development, 40: 531-547.
Sekiya, K. and R. Machida (2011) Formation of the entognathy of Dicellurata, Occasjapyx japonicus (Enderlein, 1907) (Hexapoda:Diplura, Dicellllurata). Soil Organisms, 83: 399-404.
Kenta, T., Yamada, A. and Y. Onda (2011) Clinal variation in flowering time and vernalisation requirement across a 3000-m altitudinal range in perennial Arabidopsis kamchatica ssp. kamchatica and annual lowland subspecies kawasakiana. Journal of Ecosystem & Ecography (OMICS Publishing Group), S6:001. (2011. 09) doi: 10.4172/2157-7625.S6-001.
Degawa, Y. (2011) Milospium planorbis, a lichenized helicosporous hyphomycete, new to Japan. Lichenology, 10:15-21
Hirose, D., Degawa, Y., Inaba, S. and S. Tokumasu (2011) The anamorphic genus Calcarisporiella is a new member of the Mucoromycotina. Mycoscience, doi 10.1007/s10267-011-0160-1.
Numata, S., R. O. Suzuki, S. Nishimura, Y. Naito, A. Konuma, Y. Tsumura, N. Tani, T. Okuda and M. N. Nur Supardi (2011) Fruiting behavior of dipterocarps in two consecutive episodes of general flowering in a Malaysian lowland rain forest. Journal of Forest Research, (8 October 2011), pp. 1-10, doi:10.1007/s10310-011-0308-.
Suzuki, S.N. and R. O. Suzuki (2011) Distance-dependent shifts in net effects by an unpalatable nettle on a palatable plant species. Acta Oecologica, 37: 386-392.
Hirao, A. S., T. Sato and G. Kudo (2011) Beringia, the phylogeographic origin of a circumpolar plant, Vaccinium uliginosum, in the Japanese Archipelago. Acta Phytotaxonomy et.Geobotanica, 61: 155-160.
Kudo, G., Y. Kawai and A. S. Hirao (2011) Pollination efficiency of bumblebee queens and workers: its impact on seed-set success in the alpine shrub Rhododendron aureum. International Journal of Plant Sciences, 172: 70-77.
Takahashi, H. and Y. Degawa (2011) Two new species of Agaricales and a new Japanese record for Boletellus betula from Japan. Mycoscience, 52 (Online First 1 March 2011).
Degawa, Y., Nishimura, M., Hirayama, Y., and T. Hosoya (2011) Endophytic mycobiota in Aucuba japonica in the Sagami Sea and its adjacent area, Central Japan based on molecular identification. Mem. Natl. Mus. Nat. Sci.,Tokyo, (47): 1-5.
Ikeda, H., Shimano, S. and Yamagami, A. (2011) Differentiation in Searching Behavior for Carcasses Based on Flight Height Differences in Carrion Beetles (Coleoptera: Silphidae). J Insect Behav, 24:167-174.
Dallai, R., D. Mercati, A. Carapelli, F. Nardi, R. Machida, K. Sekiya and F. Frati (2011) Sperm accessory microtubules suggest the placement of Diplura as the sister-group of Inscta s.s. Arthropod Structure and Development, 40 (1): 77-92.
Wipfler, B., R. Machida, B. Muller and R. G. Beutel (2011) On the head morphology of Grylloblattodea (Insecta) and the systematic position on the order, with a new nomenclature for the head muscles of Dicondylia. Systematic Entomology, 36 (2): 241-266.
大坪奏・出川洋介編 (2011) 入生田菌類誌資料 第一巻(Mycota of Iryuda. Vol.1). 180p., 神奈川県立生命の星・地球博物館菌類ボランティアグループ(Mycological Volunteer group of Kanagawa Prefectural Museum of Natural History), 小田原. (科研費基盤研究C 課題成果, http://nh.kanagawa-museum.jp/kenkyu/plant/mycotairyuda01/MycotaIryuda01_All_ 20110330web.pdf)
河合忍・出川洋介・日野晶也 (2011) 中心体を有する植物(イチョウ)におけるイトマキヒトデの精子中心体DNA相同配列の探索(Searches on the DNA sequences of plant (Ginkgo biloba) which has centriole, homologous to the DNA sequences of centrioles of spermatozoon of Patiria pectinifera). Science Journal of Kanagawa University, 22: 57-62.
Suzuki, R.O. Numata, S., Okuda, T., Nur Supardi M.N., Abd. Rahman K. & Kachi, N. (2012) Species associations among dipterocarp species co-occurring in a Malaysian tropical rain forest. Journal of Tropical Ecology 28: 281-289.
Suzuki, R.O. and S. N. Suzuki (2012) Morphological adaptation of a palatable plant to long-term grazing can shift interactions with an unpalatable plant from facilitative to competitive. Plant Ecology, 213: 175-183.
Dallai, R., D. Mercati, M. Gottardo, R. Machida, Y. Mashimo and R. G. Beutel (2012) The fine structure of the female reproductivesystem of Zorotypus caudelli Karny (Zoraptera). Arthropod Structure and Development, 41(4): 51-63.
Dallai, R., D. Mercati, M. Gottardo, A. T. Dossey, R. Machida, Y. Mashimo and R. G. Beutel (2012) The male and female reproductive systems of Zorotypus hubbardi Caudell, 1918 (Zoraptera). Arthropod Structure and Development, 41: 337-359.
An, K.-D., Degawa, Y., Fujiwara, E., Mikawa, T., Ohkuma, M., and Okada G. (2012) Molecular phylogenetic analyses based on the nuclear rRNA genes and the introne exon structures of the nuSSU rRNA gene in Dictyocatenulata alba (anamorphic Ascomycota). Fungal Biology 116: 1134-1145. http://dx.doi.org/10.1016/j.funbio.2012.08.005.
Fujita, M. and R. Machida (2012) Oothecae and eggs of Eucorydia yasumatsui Asahina (Insecta: Blattodea,Polyphagidae). Proceedings of the Arthropodan Embryological Society of Japan, 47: 37-38.
Mashimo, Y. and R. Machida (2012) Egg structure of three zprapteran species. Proceedings of the Arthropodan Embryological Society of Japan, 47: 39-40.
Sakamoto, S., Suzuki, S., Degawa, Y., Koshimoto C., and Suzuki, R. O. (2012) Seasonal habitat partitioning between sympatric terrestrial and semi-arboreal Japanese wood mice, Apodemus speciosus and a. argenteus in spatially heterogeneous environment. Mammal study 37(4): 261-272.
Sato, T., Moriwaki, J., Uzuhashi, S., Degawa, Y., Ono, T., and Nishimura K. (2012) Molecular phylogenetic analyses and morphological re-examination of strains belonging to three rare Colletotrichum species in Japan. Microbiol. Cult. Coll. 28: 121-134.
Tomizuka, S. and R. Machida (2012) Entognathy formation of Collembola. Proceedings of the Arthropodan Embryological Society of Japan, 47: 29-31.
福井眞生子・関谷薫・富塚茂和 (2012) 六脚類の高次系統を探る-胚と胚膜の機能分業の進化的変遷-.(Phylogenetical reconstruction of the hexapod basal clades: Evolutionary transition of the functional specialization between the embryo and embryonic membranes). 昆虫と自然,47(11): 10-14.
藤田麻里 (2012) 網翅類3目の類縁関係-ゴキブリ目のステータス-.(Affinities between dictyopteran three orders and status of Blattaria). 昆虫と自然,47(11): 15-17.
内舩俊樹 (2012) ガロアムシと多新翅類の比較発生.(Compatative embryology of Grylloblattodea and Polyneoptera). 昆虫と自然,47(11): 18-21.
鈴木亮・前迫ゆり.(2012) 春日山原始林の林床草本ミヤコカンアオイの個体群動態(Population ecology of the understory herb Asarum asperum in heavily grazed habitat in Kasugayama Forest Reserve, Nara, Japan). 地域自然史と保全 34:37-43.
堀清鷹・鈴木亮・出川洋介・村上哲明. (2012) 菅平(長野県)で新たに確認された絶滅危惧コケ植物 6 種(Six threatened bryophytes newly found in Sugadaira, Ueda-shi, Nagano Prefecture, Japan (Threatened Bryophytes in Japan)). 蘚苔類研究 10: 259-260.
鈴木晃志郎・鈴木亮.(2012) 大学緑地と竹林(Bamboo stand in an on-campus green belt). 地図中心 472: 22-23.
Yasuo Iimura,Mari Fujimoto,Kenji Tamura,Teruo Higashi,Miyuki Kondo,Masao Uchida,Koyo Yonebayazhi,Nobuhide Fujitake (2013) Black humic acid dynamics during natural reforestation of japanese pampas grass(Miscanthus sinensis) Soil Biology & Biochemistry 57: 60-67.
Schoville, S. D., T. Uchifune and R. Machida (2013) Colliding fragment islands transport independent lineages of endemic rock-crawlers (Grylloblattodea: Grylloblattidae) in the Japanese archipelago. Molecular Phylogeneticus and Evolution, 66: 915-927.
Dallai, R., M. Gottardo, D. Mercati, R. Machida, Y. Mashimo, Y. Matsumura and R.G. Beutel (2013) Divergent mating patterns and a unique mode of external sperm transfer in Zoraptera: An enigmatic group of pterygote insects. Naturwissenschaften, 100(6): 581-594.
Degawa, Y. (2013) Verrucocephalum, a new nematophagous genus in the Helicocephalidaceae. Mycoscience, 55: 144-148. dx.doi.org/10.1016/j.myc.2013.07.002.
Hirose, D., Degawa, Y., Yamamoto, K., and Yamada A. (2013) Sphaerocreas pubescens is a member of the Mucoromycotina closely related to fungi associated with liverworts and hornworts. Mycoscience 55: 221-226.
Hosoya, T, Hosaka, K., Saito, Y., Degawa Y., and Suzuki, R. (2013) Naemacyclus culmigenus, a newly reported potential pathogen to Miscanthus sinensis, new to Japan. Mycoscience, 53: 433-437.
Mashimo, Y., Y. Kazunori, M.S. Engel, I.A. Ghani, R. Dallai, R.G. Beutel and R. Machida (2013) Zorotypus in Peninsular Malaysia (Zoraptera: Zorotypidae), with the description of three new species. Zootaxa, 3717 (4): 498-514.
Matsumura, Y., R. Machida, B. Wipfler, R. G. Beutel and K. Yoshizawa (2013) Parallel evolution of novelties: Extremely long intromittent organs in the leaf beetle subfamily Criocerinae. Evolution and Development, 15: 305-315.
Numata S, Yasuda M, Suzuki RO, Hosaka T, Noor NSM, et al. (2013) Geographical Pattern and Environmental Correlates of Regional-Scale General Flowering in Peninsular Malaysia. PLoS ONE 8(11): e79095. doi:10.1371/journal.pone.0079095.
Sasaki, G., K. Ishiwata, R. Machida, T. Miyata and Zh.-H. Su (2013) Molecular phylogenetic analyses support the monophyly of Hexapoda and suggest the paraphyly of Entognatha. BMC Evolutonary Biology, 13: 236. doi: 10.1186/1471-2148-13-236.
Suzuki RO, Kachi N. (2013) Effects of local densities and abiotic microenvironments on reproductive outputs of a biennial, Lysimachia mauritiana var. rubida. Plant Species Biology, 29: 217-224.
Takagi, E. & Togashi, K. (2013) Oviposition of the seed parasitoid wasp Macrodasyceras hirsutum (Hymenoptera: Torymidae) into seeds of nonhost tree Ilex latifolia. Journal of Entomological Research Society, 15(2), 17-20.
Takagi, E. & Togashi, K. (2013) Distribution patterns of Macrodasyceras hirsutum eggs among Ilex integra seeds and berries. Canadian Entomologist, 145, 639-646.
Masaki J. Kobayashi, Yayoi Takeuchi, Tanaka Kenta, Tomonori Kume, Bibian Diway, Kentaro K. Shimizu. (2013) Mass flowering of the tropical tree Shorea beccariana was preceded by expression changes in flowering and drought-responsive genes. Molecular Ecology, 22: 4767-4782. doi: 10.1111/mec.12344.
Hosoya T, Hosaka, K., Saito, Y., Degawa, Y. and Suzuki, R. (2013) Naemacyclus culmigenus, a newly reported potential pathogen to Miscanthus sinensis, new to Japan. Mycoscience, 54(6): 433-437.
田中健太・平尾章・鈴木亮・飯島慈裕・浜田崇・尾関雅章・廣田充(2013)地球温暖化が山岳域と極域の生態系に与える影響 ― 人工温暖化実験によって何がわかってきたか? ―. (Impact of global warming on mountain and polar ecosystems: what have artificial warming experiments told?). 地学雑誌 122(4): 628-637.
瀬戸健介・稲葉重樹・出川洋介 (2013) 日本新産のサヤミドロモドキ(Monoblepharis)属菌(ツボカビ門)2 種について(Two species of Monoblepharis new to Japan). 日本菌学会報, 54: 27-31.
金井隆治・正木大祐 (2013) 森林・草原の温暖化実験装置の温暖化効率と維持管理 (Warming efficiency and maintenance of forest/grassiand warming experiment equipment), 筑波大学技術報告 33:75-81.
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Blanke, A., Machida, R., Swzucsich, N. U., Wilde, F. and Misof, B (2014) Mandibles with two joints evolved much earlier in the history of insects: Dicondyly is a synapomorphy of bristletails, silverfish and winged insects. Systematic Entomology, 40(2): 357-364. DOI: 10.1111/syen.12107.
Dallai, R., M. Gottardo, D. Mercati, R. Machida, Y. Mashimo, Y. Matsumura and R.G. Beutel (2014) Giant spermatozoa and a huge spermatheca: A case of coevolution of male and female reproductive organs in the ground louse Zorotypus impolitus (Insecta, Zoraptera). Arthropod Structure and Development, 43: 135-151.
Dallai, R., M. Gottardo, D. Mercati, R. Machida, Y. Mashimo, Y. Matsumura, J.A. Rafael and R.G. Beutel (2014) Comparative morphology of spermatozoa and reproductive systems of zorapteran species from different world regions (insecta, Zoraptera). Arthropod Strucuture and Development, 43(4): 371-383.
Degawa, Y., Ohsawa, K., Suyama, M., N. Morishita (2014) Mortierella thereuopodae, a new species with verticillate large sporangiophores, inhabiting fecal pellets of Scutigeromorpha. Mycoscience, 55: 308-313, dx.doi.org/10.1016/j.myc.2013.11.004.
Fujita, M. and R. Machida (2014) Reproductive biology and postembryonic development of a polyphagid cockroach Eucorydia yasumatsui Asahina, 1971 (Insecta: Blattodea: Polyphagidae). Arthropod Systematics and Phylogeny, 72(2): 193-211.
Hosoya, T., Zhao, Y.J. and Degawa, Y. (2014) Poculum pseudosydowianum, sp. nov. (Rutstroemiaceae, Ascomycota) from Japan and its endophytic occurrence. Phytotaxa 175(4): 216-224.
Kameyama Y, Hirao AS. (2014) Development and evaluation of microsatellite markers for gynodioecious shrub, Daphne jezoensis (Thymelaeaceae). Applications in Plant Sciences.2(5):1400001.
Mashimo, Y., R.G. Beutel, R. Dallai, C.Y. Lee and R. Machida (2014) Embryonic development of Zoraptera with special reference to external morphology (Insecta). Journal of Morphology, 275: 295-312.
Mashimo, Y., R.G. Beutel, R. Dallai, C.Y. Lee and R. Machida (2014) Postembryonic development of the ground louse Zorotypus caudelli Karny (Insecta: Zoraptera: Zorotypidae). Arthropod systematics and Phylogeny, 72: 54-71.
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Nagano, Y., Abe, K., Kitazawa, T., Hattori, M., Hirao, A. S. and Itino, T. (2014) Changes in pollinator fauna cause altitudinal variation of floral size in a bumblebee-pollinated herb. Ecology and Evolution.4: 3395-3407.
Niitsu, S., K. Toga, S. Tomizuka, K. Maekawa, R. Machida and T. Kamito (2014) Ecdysteroid-induced programmed cell death is essential for sex-specific wing degeneration for the wingless-female winter moth. PLoS One, 9 (2): e89435.
Sato, Y., Alba JM, Sabelis MW (2014) Testing for reproductive interference in the population dynamics of two congeneric species of herbivorous mites. Heredity, 113: 495-502.
Sato Y, Sabelis MW, Egas M (2014) Alternative male mating behaviour in the two-spotted spider mite: dependence on age and density. Animal Behaviour, 92: 125-131.
Suzuki, R.O. (2014) Combined effects of warming, snowmelt timing, and soil disturbance on vegetative development in a grassland community. Plant Ecology, 215, 1399-1408.
Takagi, E., Matsushita, N., Togashi, K. & Hogetsu, T. (2014) Isolation and characterization of 14 microsatellite markers in Macrodasyceras hirsutum (Hymenoptera: Torymidae). Applied Entomology and Zoology, 49, 197-200.
Takagi, E. (2014) Herbivory by Strongylocoris leucocephalus (Hemiptera: Miridae) on a novel host plant Adenophora triphylla var. japonica in Japan. Journal of Asia-Pacific Entomology, 17, 499-503.
Wipfler, B., M. Bai, S. Schoville, R. Dallai, T. Uchifune, R. Machida, Y. Cui and R.G. Beutel (2014) Ice crawlers (Grylloblattodea) – The history of the investigation of a highly unusual group of Insects. Journal of Insect Biodiversity, 2 (2): 1-25
出川洋介, 陶山舞, 瀬戸健介, 中島淳志, 森下奈津子, 細矢剛, 保坂健太郎, 2014. 皇居吹上御苑のケカビ類(Mucoralean fungi collected at the Imperial Palace, Tokyo). Mem. Natl. Mus. Nat. Sci., Tokyo, 国立科博専報 (49): 147-169.
Dallai, R., Gottardo, D. Mercati, J. A. Rafael, R. Machida, Y. Mashimo, Y. Matsumura and R. G. Beutel (2014) The intermediate sperm type and genitalia of Zorotypus shannoi Gurney – Evidence supporting infraordinal lineages in Zoraptera (Insecta). Zoomorphology, 134(1): 79-91. DOI 0.1007a/s00435-014-0244- 5.
Teruyoshi Nagamitsu, Satoshi Kikuchi, Mayuko Hotta, Tanaka Kenta and Tsutom Hiura. (2014) Effects of Population Size, Forest Fragmentation, and Urbanization on Seed Production and Gene Flow in an Endangered Maple (Acer miyabei). The American Midland Naturalist 172:303-316.
Blanke, A., P.T. Rühr, R. Mokso, P. Villanueva, F. Wilde, M. Stampanoni, K. Uesugi, R. Machida and B. Misof (2015) Structural mouthpart interactions evolved already earliest lineages of insects. Proceedings of the Royal Society B (Proceedings B) 282:20151033.
Blanke, A., Busse, S. and Machida, R. (2015) Coding characters from different life stages for phylogenetic reconstruction: a case study on dragonfly adults and larvae including a description of the larval head anatomy of Epiophlebia superstes (Odonata: Epiophlebiidae). Zoological Journal of the Linnean Society, Online: 27 MAR 2015, DOI:10.1111/zoj.12258.
Dallai, R., Gottardo, M. Mercati, D., Rafael, J. A., Machida, R., Mashimo, Y., Matsumura, Y. and Beutel, R. G. (2015): The intermediate sperm type and genitalia of Zorotypus shannoi Gurney – Evidence supporting infraordinal lineages in Zoraptera (Insecta). Zoomorphology, 134(1): 79-91.
Dallai, R., Thipaksorn, A., Gottardo, M., Mercati, D., Machida, R. and Beutel, R. G. (2015): The sperm structure of Cryptocercus (Blattodea) and sperm evolution in Dictyoptera. Journal of Morphology, 276(4): 361-369.
Degawa, Y., Hosoya, T., Hosaka, K., Hirayama Y., Saito, Y. and Zhao, Y-J. (2015) Rediscovery of Roesleria subterranea from Japan with a discussion of its infraspecific relationships detected using molecular analysis. Mycokeys, 9: 1-9.
Hirao, A. S., Watanabe, M., Liu, Q.-J., Li, X., Masuzawa, T., Ohara, M. and Wada, N. (2015) Low genetic diversity and high genetic divergence in southern rear-edge populations of Dryas octopetala in the high mountains of Far East Asia. Acta Phytotaxonomica et Geobotanica, 66(1), 11-22.
Fanciulli, P. P., D. Mercati, R. Machida and R. Dallai (2015) Spermiogenesis and sperm ultrastructure of Machilontus sp (Insecta: Archaeognatha) with phylogenetic consideration. Micron, 73: 47-53.
Fraulob, M., R. G. Beutel, R. Machida and H. Pohl (2015) The embryonic development of Stylops ovinae (Strepsiptera, Stylopidae) with emphasis on external morphology. Arthropod Structure and Development, 44(1): 42-68.
Hayashi, Y., Ogai, T. and Nagasawa, R. (2015) Discovery of a New Sciaphyes Species (Coleoptera: Leiodidae: Leptodilini) from Honshu, Japan. Japanese Journal of Systematic Entomology, 21 (1), 165-167.
Mashimo Y, RG Beutel, R Dallai, M Gottardo, C-Y Lee, AT Dossey, R Machida (2015) The morphology of the eggs of the three species of Zoraptera (Insecta). Arthropod Structure & Development, 44:656-666.
Matsumura, Y., Wiplfer, B., Pohl, H., Dallai, R., Machida, R., Mashimo, Y., Camera, J.T., Rafael, J.A. and Beutel, R.G. (2015): Cephalic anatomy of Zorotypus weidneri New, 1978: New evidence for a placement of Zoraptera in Polyneoptera. Arthropod Systematics and Phylogeny 73 (1): 67-87.
Nagano Y, Hirao AS, Itino T (2015) Genetic structure of hybrid zone between two violets Viola rossii and V. bissetii: dominance of F1 individuals in a narrow contact range. Plant Species Biology. 30(3): 237-243.
Nakagaki Y, M Sakuma, R Machida (2015) Expression of engrailed-family genes in the jumping bristletail and discussion on the primitive pattern of insect segmentation. Development, Genes & Evolution, 225: 313-318.
Saeki I, Hirao AS, Kenta T. (2015) Development and evaluation of microsatellite markers for Acer miyabei (Sapindaceae), a threatened maple species in East Asia. Applications in Plant Sciences 3(6) : 1500020.
Sakamoto, S.H., *Suzuki, S.N., Koshimoto, C, Okubo, Y., Eto, T. and *Suzuki, R.O. (2015): Trap distance affects the efficiency and robustness in monitoring the abundance and composition of forest-floor rodents. Journal of Forest Research, 20, 151-159. *Equally contributing authors.
Sato, Y., Breeuwer, J.A.J., Egas, M., and Sabelis, M.W. (2015) Incomplete premating and postmating reproductive barriers between two parapatric populations of a social spider mite. Experimental and Applied Acarology, 65: 277-291
Seto K, Degawa Y (2015) Cyclopsomyces plurioperculatus: a new genus and species of Lobulomycetales (Chytridiomycota, Chytridiomycetes) from Japan. Mycologia, 107(3): 633-640. DOI:10.3852/14-284.
Suzuki, R.O., Degawa, Y., Suzuki, N.S. and Hosoya, T. (2015) Local-and regional-scale spatial patterns of two fungal pathogens of Miscanthus sinensis in grassland communities. Mycoscience, 56: 42-48.
Tomizuka, S. and Machida, R. (2015) Embryonic development of a collembolan,Tomocerus cuspidatus Borner, 1909, with special reference to the development and developmental potential of serosa (Hexapoda: Collembola, Tomoceridae). Arthropod Structure and Development 44(2): 157-172.
Takagi, E. and Ogai, T. (2015) New distribution record of Reticulitermes speratus Kolbe (Isoptera: Rhinotermitidae) in the coldest highland in central Japan. Sociobiology, 62, 460-461.
Yamamoto, K, Degawa, Y., Hirose, D., Yamada, A. (2015) Morphology and phylogeny of four Endogone species and Sphaerocreas pubescens collected in Japan. Mycological Progress 14, DOI 10.1007/s11557-015-1111-6.
Yavorskaya, M. I., K. Kojima, R. Machida and R. G. Beutel (2015) Morphology of the first instar larva of Tenomerga mucida (Chebrolat, 1829) (Coleoptera: Archostemata: Cupedidae). Arthropod Systematics & Phylogeny 73(2):241-260.
Matsumura, Y., B. Wiplfer, H. Pohl, R. Dallai, R. Machida, Y. Mashimo, J.T. Camera, J.A. Rafael, R.G. Beutel (2015) Cephalic anatomy of Zorotypus weidneri New, 1978: New evidence for a placement of Zoraptera in Polyneoptera. Arthropod Systematics and Phylogeny, 73 (1): 67-87.
Ogai, T., and T. Kenta, (2015) The effects of vegetation types and microhabitats on carabid beetle community composition in cool temperate Japan. Ecological Research:1-12.
Urakawa R., et al. (with Kenta, T. at 13th position in total 26 authors) (2015): Biogeochemical nitrogen properties of forest soils in the Japanese archipelago. Ecological Research, 30, 1-2.
Zhou C, M Tan, S Du, R Machida, X Zhou (2015) The mitochondrial genome of the winter stonefly Apteroperla tikumana (Plecoptera, Capniidae). Mitochondrial DNA, DOI:10.3109/19401736.2015.1063120.
正木大祐・金井隆治・長岡講二・佐藤美幸・勝山麻里子 (2015) リタートラップを使用した長期調査 (Long-time ecological research using by litter-fall traps), 筑波大学技術報告35:35-38.
Chaves, C., C. Derst, A. Franzen, Y. Mashimo, R. Machida and B. Musset (2016) Identification of an Hv1 voltage-gated proton channel in insect. FEBS Journal 283:1453-1464, DOI: 10.1111/febs.13680.
Blanke, A. and R. Machida (2016) The homology of cephalic muscles and endoskeletal elements between Diplura and Ectognatha (Insecta). Organisms Diversity and Evolution, DOI: 10.1007/s13127-015-0251-5.
Dallai, R., D. Mercati, Y. Mashimo, R. Machida and R. G. Beutel (2016) The fine structure of the rectal pads of Zorotypus caudelli Karny (Zoraptera, Insecta). Arthropod Structure and Development, 45: 380-388.
Meusemann, K., D. Bartel, N. Szuschich, A. Bohm, M. Walzl, G. Timelthaler, G. Pass, A. Blanke, M. Petersen, P. Rühr, R. Machida, K. Sekiya, Y. Nakagaki, S. Tomizuka, M. Fukui, B. Misof and on the behalf of the 1KITE Consortium (2016) Introducing the 1KITE Project and first results on Phylogenomics of apterygote hexapods bassed on thousands of orthologous genes. Proceedings of the Arthropodan Embryological Society of Japan, 49: 5.
Matsushima, M. and R. Machida (2016) Early embryonic development of Reticulitermes speratus (Kolbe, 1885) (Insecta: Isoptera, Rhinotermitidae). Proceedings of the Arthropodan Embryological Society of Japan, 49: 7.
Fujita, M. and R. Machida (2016) Embryonic development of Eucorydia yasumatsui Asahina (Insecta: Blattodea, Corydiidae). Proceedings of the Arthropodan Embryological Society of Japan, 49: 9.
Tomizuka, S., M. Fukui, K. Sekiya and R. Machida (2016) Entognathy formations of three entognathan orders: A phylogenetic argument. Proceedings of the Arthropodan Embryological Society of Japan, 49: 13.
Machida, R., M. Fukui, K. Sekiya and S. Tomizuka (2016) Early splitting of Hexapoda reviewed from the comparative embyrology. Proceedings of the Arthropodan Embryological Society of Japan, 49: 15.
Mashimo, Y. and R. Machida (2016) Postembryonic development of Zorotypus caudelli Karny (Insecta, Zoraptera, Zorotypidae). Proceedings of the Arthropodan Embryological Society of Japan, 49: 17.
Fujita, M., A. Blanke, S. Nomura and R. Machida (2016) Simple, artifact-free SEM observations of insect embryos: Application of the Nano-suit Method to insect embryology. Proceedings of the Arthropodan Embryological Society of Japan, 50: 7-10.
Mtow, S. and R. Machida (2016) Comparative embryology of Plecoptera (Insecta). Proceedings of the Arthropodan Embryological Society of Japan, 50: 15.
Kojima, K. and R. Machida (2016) Embryology of a “living fossil” beetle, Tenomerga mucida (Chevrolat, 1829) (Archostemata, Cupedidae). Proceedings of the Arthropodan Embryological Society of Japan, 50: 17.
Mashimo, Y. and R. Machida (2016) A challenge to the subcoxal theories of pleural and sternal origins in insects. Proceedings of the Arthropodan Embryological Society of Japan, 50: 21.
Urakawa, R., N. Ohte, H. Shibata, K. Isobe, R. Tateno et al., (2016) Factors contributing to soil nitrogen mineralization and nitrification rates of forest soils in the Japanese archipelago. Forest Ecology and Management 361:382-396.
Bagnoli F*, Tsuda Y*, Fineschi S, Bruschi P, Magri D, Zhelev P, Paule L, Simeone MC, González-Martínez SC, Vendramin GG (2016) Combining molecular and fossil data to infer demographic history of Quercus cerris: insights on European eastern glacial refugia. Journal of Biogeography, 43: 679-690. *equal contribution
Soliani G, Mujitar VE, Tsuda Y, Vendramin GG, Gallo L (2016) The effect of silvicultural management on the genetic diversity of a mixed Nothofagus forest in Lanin Natural Reserve, Argentina. Forest Ecology and Management 363: 11-20.
Tsuda Y*, Chen J,* Stocks M*, Källman T, Sønstebø, JH, Parducci L, Semerikov V, Sperisen C, Politov D, Ronkainen T, Valiranta M, Vendramin GG, Tollefsrud MM, Lascoux M (2016) The extent and meaning of hybridization and introgression between Siberian spruce (Picea obovata) and Norway spruce (P. abies): cryptic refugia as stepping stones to the west?. Molecular Ecology 25, 2773-2789. doi:10.1111/mec.13654. *equal contribution
Sato Y, Rühr PT, Schmitz H, Egas M, Blanke A (2016) Age-dependent male mating tactics in a spider mite – a life history perspective. Ecology and Evolution 6: 7367-7374
Sato Y, Alba JM, Egas M, Sabelis MW (2016) The role of web sharing, species recognition and hostplant defence in interspecific competition between two herbivorous mite species. Experimental and Applied Acarology 70: 261-274.
da Silva FR, de Moraes GJ, Lesna I, Sato Y, Vasquez C, Hanna R, Sabelis MW, Janssen A (2016) Size of predatory mites and refuge entrance determine success of biological control of the coconut mite. BioControl 61:681-689.
Piyasaengthong N, Sato Y, Kinoshita N, Kainoh Y (2016) Oviposition preference for leaf age in the smaller tea tortrix Adoxophyes honmai (Lepidoptera: Tortricidae) as related to performance of neonates. Applied Entomolozy and Zoology 51: 363-371
Piyasaengthong N, Kinoshita N, Sato Y, Kainoh Y (2016) Sex specific elicitor from Adoxophyes honmai (Lepidoptera:Tortricidae) induces tea leaf to arrest the egg-larval parasitoid Ascogaster reticulata (Hymenoptera: Braconidae). Applied Entomolozy and Zoology 51: 353-362
Sato Y, Staudacher H, Sabelis WM (2016) Why do males choose heterospecific females in the red spider mite? Experimental and Applied Acarology 68: 21-31.
Faulks, LK, and Östman Ö (2016) Genetic diversity and hybridisation bet ween native and introduced Salmonidae fishes in a Swedish alpine lake. PLoS ONE 11(3): e0152732
Faulks, LK, and Östman Ö (2016). Adaptive major histocompatibility comp lex (MHC) and neutral genetic variation in two native Baltic Sea fishes (per ch Perca fluviatilis and zander Sander lucioperca) with comparisons to an in troduced and disease susceptible population in Australia (P. fluviatilis): a ssessing the risk of disease epidemics. Journal of Fish Biology 88: 1564-83.
Faulks, LK, Kerezsy, A, Unmack, PJ, Johnson, J and Hughes, JM (2017) Going, going, gone? Loss of genetic diversity in two critically endangered Australian freshwater fishes, Scaturiginichthys vermeilipinnis and Chlamydogobius squamigenus, from Great Artesian Basin springs at Edgbaston, Queensland, Australia. Aquatic Conservation: Marine and Freshwater Ecosystems 27: 39-50.
Takagi, E. (2016) Pests of the endangered herb Platycodon grandiflorus in central Japan. Journal of the Entomological Research Society, 18, 1-5.
Chaves, G., Derst, C., Franzen, A., Mashimo, Y., Machida, R., Musset, B. (2016) Identification of an HV1 Voltage-Gated Proton Channel in Insects. FEBS Journal 283:1453-1464.
Tsuda Y, Semerikov V, Sebastiani F, Vendramin GG, Lascoux M. Multispecies genetic structure and hybridization in the Betula genus across Eurasia. Molecular Ecology, DOI: 10.1111/mec.13885.
Imai R*, Tsuda Y*, Matsumoto S, Ebihara A, Watano Y. The relationship between mating system and genetic diversity in diploid sexual populations of Cyrtomium falcatum in Japan. Plos One, 11, e0163683. *equal contribution
Yamamoto T*, Tsuda Y*, Mori GM, Cruz MV, Shinmura Y, Shan AWK, Takayama K, Asakawa T, Yamakawa T, Suleiman M, Núñez-Farfán J, Webb EL, Watano Y, Kajita T (2016) Development and characterization of 27 microsatellite markers for the mangrove fern, Acrostichum aureum (Pteridaceae). Applications in Plant Sciences, 4: 1600042.*equal contribution
Bodare S, Ravikanth G, Ismail SA, Patel MK, Spanu I, Vasudeva R, Shaanker RU, Vendramin GG, Lascoux M, Tsuda Y* (2016) Fine- and local- scale genetic structure of Dysoxylum malabaricum, a late-successional canopy tree species in disturbed forest patches in the Western Ghats, India. Conservation Genetics, 18,1-15. doi:10.1007/s10592-016-0877-7. *corresoinding author.
Keiko K, Matsui T, Kobayashi M, Saitou H, Namikawa K, Tsuda Y (2016) Genetic diversity and northward expansion at the northern Fagus crenata. Japanese Journal of Forest Environment 58: 1-8. (in Japanese with English abstract)
Iwasaki T, Sakaguchi S, Tsuda Y (2016) Ecological niche modeling provides novel developments in phylogeography: applications and limitations. Journal of Phytogeography and Taxonomy 64:1-15. (in Japanese with English abstract)
Shiraishi H, Tsuda Y, Takamatsu S, Tsumura Y, Matsumoto A (2016) Genetic diversity evaluation of Quercus serrata population in Saitama Pref. for revegetation technology with consideration for genetic resource conservation in region. Journal of the Japanese Society of Revegetation Technology 41: 402-409. (in Japanese with English abstract)
Saito Y, Zhang Y-X, Mori K, Ito K, Sato Y, Chittenden AR, Lin J-Z, Chae Y, Sakagami T, Sahara K (2016) Variation in nesting behavior of eight species of spider mites, Stigmaeopsis having sociality. NatureWissenschaften 103 (9-10): Article 87
Yamamoto K, Degawa Y, Takashima Y, Fukuda M, Yamada A, 2016. Endogone corticioides sp. nov. from subalpine conifer forests in Japan and China, and its multi-locus Phylogeny. Mycoscience. http://dx.doi.org/10.1016/j.myc.2016.08.001.
Yamamoto K, Endo N, Degawa Y, Yamada A, 2016. First detection of Endogone ectomycorrhizas in natural oak forests. Mycorrhiza. doi: 10.1007/s00572-016-0740-1.
Seto K, Kagami M, Degawa Y, 2016. Phylogenetic position of parasitic Chytrids on diatoms: Characterization of a novel clade in Chytridiomycota. Journal of Eukaryotic Microbiology doi: 10.1111/jeu.12373.
Ogai, T., and T. Kenta. (2016) The effects of vegetation types and microhabitats on carabid beetle community composition in cool temperate Japan. Ecological Research: 31:177-188
Urakawa, R., N. Ohte, H. Shibata, K. Isobe, R. Tateno et al., (2016) Factors contributing to soil nitrogen mineralization and nitrification rates of forest soils in the Japanese archipelago. Forest Ecology and Management 361:382-396. * Ecological Research Awardを受賞
Tim Paape, Masaomi Hatakeyama, Teo Cereghetti, Rie Shimizu-Inatsugi, Yoshihiko Onda, Kenta Tanaka, Jun Sese, Kentaro Shimizu. (2016) Conserved but attenuated parental gene expression in allopolyploids: constitutive zinc hyperaccumulation in the allopolyploid Arabidopsis kamchatica as a quantitative trait. Molecular Biology and Evolution 33:2781-2800 (査読有)
Kenta T, Edwards JEM, Butlin RK, Burke T, Quick WP, Urwin P, Davey MP(2016) Tissue culture as a source of replicates in non-model plants: Variation in cold Response in Arabidopsis lyrata ssp. petraea. Genes Genomes Genetics 6 (12):3817-3823.doi:10.1534/g3.116.034314
Blanke, A. and R. Machida (2016) Structural mouthpart interaction evolved already in the earliest lineages of insects”. In: SPring-8/Sacla Research Frontiers 2015, 36-37.
Mashimo, Y., M. Fukui and R. Machida (2016) Egg structure and ultrastructure of Paterdecolyus yanbarensis (Insecta, Orthoptera, Anostostomatide, Anabropsinae). Arthropod Structure and Development, 45: 637-641.
佐藤美幸・正木大祐 (2016) 赤外線センサーカメラによる長野県上田市菅平高原の哺乳類相と鳥類調査 (Mammalian and avian fauna surveyed by infrared digital trail camera in Sugadaira highland, Ueda City, Nagano Prefecture, Japan). 筑波大学技術報告 36: 42-45.
町田龍一郎 (2016) 監修・執筆 日本産直翅類標準図鑑.(The Standard of Polyneoptera in Japan).学研.
Itino T, Hirao AS (2016) Plant genetic diversity and plant-pollinator interactions along altitudinal gradients. In G. Kudo [ed.] “Structure and Function of Mountain Ecosystems in Japan: Biodiversity and ecological functioning of mountain ecosystems (Ecological Research Monographs)”. Springer. Pp 63-88.
Sakamoto H, Matsuda T, Lesna I, Suzuki R, Saito Y, Lin J-Z, Zhang Y-X, Sato Y & Gotoh T (2017) Molecular identification of seven species of the genus Stigmaeopsis (Acari: Tetranychidae) and preliminary attempts to establish their phylogenetic relationship. Systematic & Applied Acarology 22(1): 91-101.
B Knegt, T Potter, NA Pearson, Y Sato, H Staudacher, BCJ Schimmel, ET Kiers and M Egas (2017) Detection of genetic incompatibilities in non-model systems using simple genetic markers: hybrid breakdown in the haplodiploid spider mite Tetranychus evansi. Heredity 118: 311-321. Molecular identification of seven species of the genus Stigmaeopsis (Acari: Tetranychidae) and preliminary attempts to establish their phylogenetic relationship. Systematic & Applied Acarology 22(1): 91-101.
金井隆治・正木大祐・佐藤美幸 (2017) 教育関係共同利用拠点への取り組み (Activities for Center of Excellence for Education). 筑波大学技術報告 37: 36-39.
Dallai, R., D. Mercati, Y. Mashimo, R. Machida and R.G. Beutel (2017) The morphology and ultrastructure of salivary glands of Zoraptera (Insecta). (in press).
Suzuki RO, Kenta T, Sato M, Masaki D, Kanai R. (2016) Continuous harvesting of a dominant bracken alters a cool-temperate montane grassland community and increases plant diversity in Nagano, Japan. Ecological Research 31: 639-644.
Sato Y, Mashimo Y, Suzuki RO, Hirao A, Takagi E, Kanai R, Masaki D, Sato M, Machida R (2017) Potential impact of an exotic plant invasion on both plant and arthropod communities in a semi-natural grassland on Sugadaira Montane in Japan. Journal of Developments for Sustainable Agriculture, 12:52-64.
Sakamoto H, Matsuda T, Suzuki R, Saito Y, Lin J-Z, Zhang Y-X, Sato Y, Gotoh T (2017) Molecular identification of seven species of the genus Stigmaeopsis (Acari: Tetranychidae) and preliminary attempts to establish their phylogenetic relationship. Systematic & Applied Acarology 22: 91-101.
Beheregaray, LB, Pfeiffer, LV, Attard, CRM, Sandoval-Castillo, J, Domingos, F, Faulks, LK, Gilligan, DM, Unamck, P (in press) Genome-wide data delimits multiple climate-determined species ranges in a widespread Australian fish, the golden perch (Macquaria ambigua). Molecular Phylogenetics and Evolution.